Ligand validation:5YG8

MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5YG8_MPD_A_402	29%	54%	0.294	0.956	0.57	1.21	-	1	0	0	100%	1
5YFS_MPD_A_404	48%	57%	0.215	0.961	0.88	0.76	-	-	0	0	100%	1
5YGA_MPD_A_402	47%	58%	0.221	0.96	0.52	1.09	-	1	0	0	100%	1
5YG5_MPD_A_402	43%	53%	0.219	0.943	0.58	1.23	-	1	0	0	100%	1
5YG6_MPD_A_403	36%	70%	0.252	0.949	0.48	0.68	-	-	1	0	100%	1
5YFV_MPD_A_404	31%	41%	0.28	0.953	0.55	1.7	-	1	0	0	100%	1
9D77_MPD_A_505	100%	87%	0.032	0.998	0.16	0.52	-	-	1	0	100%	1
9H8Q_MPD_B_602	100%	82%	0.039	0.988	0.35	0.44	-	-	1	0	100%	1
7Z6B_MPD_B_307	99%	74%	0.057	0.986	0.42	0.59	-	-	0	0	100%	1
7ZOB_MPD_F_202	99%	72%	0.056	0.983	0.44	0.65	-	-	0	0	100%	1
4H15_MPD_B_313	97%	89%	0.061	0.974	0.33	0.31	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.