Download MendeleyInitial Structural Analysis of Plasmodium falciparum thioredoxin
Robien, M.A., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa ConsortiumTo be published.
1SYR | pdb_00001syr
Initial Structural Analysis of Plasmodium falciparum thioredoxin
- PDB DOI: https://doi.org/10.2210/pdb1SYR/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Plasmodium falciparum 3D7
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2004-04-01 Released: 2004-04-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.95 Å
- R-Value Free: 0.236 (Depositor), 0.225 (DCC)
- R-Value Work: 0.197 (Depositor), 0.191 (DCC)
- R-Value Observed: 0.199 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| thioredoxin | 112 | Plasmodium falciparum 3D7 | Mutation(s): 0 Gene Names: PF14_0545 |  | |
UniProt | |||||
Find proteins for Q7KQL8 (Plasmodium falciparum (isolate 3D7)) Explore Q7KQL8 Go to UniProtKB: Q7KQL8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7KQL8 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.95 Å
- R-Value Free: 0.236 (Depositor), 0.225 (DCC)
- R-Value Work: 0.197 (Depositor), 0.191 (DCC)
- R-Value Observed: 0.199 (Depositor)
Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 108.189 | α = 90 |
| b = 201.308 | β = 90 |
| c = 200.504 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| MOSFLM | data reduction |
| CCP4 | data scaling |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2004-04-13 Deposition Author(s): Robien, M.A., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Revision History (Full details and data files)
- Version 1.0: 2004-04-13
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance - Version 1.3: 2018-01-31
Changes: Database references - Version 1.4: 2024-10-16
Changes: Data collection, Database references, Refinement description, Structure summary
