Download MendeleyThe Ubiquitin-like domain of Human Ubiquilin 3
Walker, J.R., Xue, S., Avvakumov, G.V., Newman, E.M., Mackenzie, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S.To be published.
1YQB | pdb_00001yqb
Human Ubiquilin 3
- PDB DOI: https://doi.org/10.2210/pdb1YQB/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2005-02-01 Released: 2005-02-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.240 (Depositor), 0.240 (DCC)
- R-Value Work: 0.185 (Depositor), 0.190 (DCC)
- R-Value Observed: 0.187 (Depositor)
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ubiquilin 3 | 100 | Homo sapiens | Mutation(s): 0 Gene Names: UBQLN3 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9H347 (Homo sapiens) Explore Q9H347 Go to UniProtKB: Q9H347 | |||||
PHAROS: Q9H347 GTEx: ENSG00000175520 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9H347 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.240 (Depositor), 0.240 (DCC)
- R-Value Work: 0.185 (Depositor), 0.190 (DCC)
- R-Value Observed: 0.187 (Depositor)
Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 41.913 | α = 90 |
| b = 41.913 | β = 90 |
| c = 94.442 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2005-02-08 Deposition Author(s): Walker, J.R., Xue, S., Avvakumov, G.V., Newman, E.M., Mackenzie, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Revision History (Full details and data files)
- Version 1.0: 2005-02-08
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-08-23
Changes: Data collection, Database references, Refinement description
