Download MendeleyNew Insights Into the Role of the P-Loop Lysine: Implications from the Crystal Structure of a Mutant EF-G:Gdpcp Complex
Hansson, S., Logan, D.T.To be published.
2J7K | pdb_00002j7k
Crystal structure of the T84A mutant EF-G:GDPCP complex
- PDB DOI: https://doi.org/10.2210/pdb2J7K/pdb
- Classification: TRANSLATION
- Organism(s): Thermus thermophilus HB8
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2006-10-12 Released: 2007-10-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.90 Å
- R-Value Free: 0.288 (Depositor), 0.300 (DCC)
- R-Value Work: 0.226 (Depositor), 0.230 (DCC)
Starting Model: experimental
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This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ELONGATION FACTOR G | 691 | Thermus thermophilus HB8 | Mutation(s): 1 EC: 3.6.1.48 |  | |
UniProt | |||||
Find proteins for P13551 (Thermus thermophilus) Explore P13551 Go to UniProtKB: P13551 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P13551 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GCP Query on GCP | B [auth A] | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER C11 H18 N5 O13 P3 PHBDHXOBFUBCJD-KQYNXXCUSA-N |  | ||
| MG Query on MG | C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.90 Å
- R-Value Free: 0.288 (Depositor), 0.300 (DCC)
- R-Value Work: 0.226 (Depositor), 0.230 (DCC)
Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 77.23 | α = 90 |
| b = 88.68 | β = 90 |
| c = 114.9 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| XSCALE | data scaling |
Entry History
Deposition Data
- Released Date: 2007-10-23 Deposition Author(s): Hansson, S., Logan, D.T.
Revision History (Full details and data files)
- Version 1.0: 2007-10-23
Type: Initial release - Version 1.1: 2011-05-08
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-12-13
Changes: Data collection, Database references, Derived calculations, Other, Refinement description
