2K3I | pdb_00002k3i

Solution NMR structure of protein yiiS from Shigella flexneri. Northeast Structural Genomics Consortium target SfR90

PDB DOI: https://doi.org/10.2210/pdb2K3I/pdb
BMRB: 15762

Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Organism(s): Shigella flexneri 2a
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2008-05-08 Released: 2008-07-08
Deposition Author(s): Mills, J.L., Singarapu, K.K., Eletsky, A., Sukumaran, D.K., Wang, D., Jiang, M., Ciccosanti, C., Xiao, R., Liu, J., Baran, M.C., Swapna, G.V.T., Acton, T., Rost, B., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

wwPDB Validation 3D Report Full Report

This is version 1.6 of the entry. See complete history.

Literature

Solution NMR structures of proteins VPA0419 from Vibrio parahaemolyticus and yiiS from Shigella flexneri provide structural coverage for protein domain family PFAM 04175.

Singarapu, K.K., Mills, J.L., Xiao, R., Acton, T., Punta, M., Fischer, M., Honig, B., Rost, B., Montelione, G.T., Szyperski, T.

(2010) Proteins 78: 779-784

PubMed: 19927321 Search on PubMedSearch on PubMed Central
DOI: https://doi.org/10.1002/prot.22630
Primary Citation of Related Structures:
2JZ5, 2K3I

Organizational Affiliation

Department of Chemistry, State University of New York at Buffalo, Buffalo, New York 14260, USA.

Macromolecule Content

Total Structure Weight: 12.03 kDa
Atom Count: 839
Modeled Residue Count: 109
Deposited Residue Count: 109
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein yiiS	A	109	Shigella flexneri 2a	Mutation(s): 0 Gene Names: yiiS, S3747, SF4000
UniProt
Find proteins for P32162 (Escherichia coli (strain K12)) Explore P32162 Go to UniProtKB: P32162
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P32162
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2008-07-08

Deposition Author(s):

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2008-07-08
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2012-03-07
Changes: Structure summary
Version 1.3: 2014-04-02
Changes: Source and taxonomy
Version 1.4: 2020-02-19
Changes: Data collection, Database references, Other
Version 1.5: 2023-06-14
Changes: Database references, Other
Version 1.6: 2024-05-08
Changes: Data collection, Database references

Prepare Data

Validate Data

Deposit Data

Help and Resources

.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 2K3I | pdb_00002k3i

Solution NMR structure of protein yiiS from Shigella flexneri. Northeast Structural Genomics Consortium target SfR90

Solution NMR structures of proteins VPA0419 from Vibrio parahaemolyticus and yiiS from Shigella flexneri provide structural coverage for protein domain family PFAM 04175.

Entity ID: 1

UniProt

Entity Groups

Sequence Annotations

Expand

Experimental Data

Structure Validation

Deposition Data

Revision History (Full details and data files)

2K3I | pdb_00002k3i