Download MendeleyThe Apo Crystal Structure of Plasmodium Falciparum Lactate Dehydrogenase
Birkinshaw, R.W., Brady, R.L.To be published.
2X8L
Plasmodium falciparum lactate dehydrogenase apo structure
- PDB DOI: https://doi.org/10.2210/pdb2X8L/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Plasmodium falciparum
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-03-10 Released: 2010-03-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.167
- R-Value Work: 0.136
- R-Value Observed: 0.137
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| L-LACTATE DEHYDROGENASE | 322 | Plasmodium falciparum | Mutation(s): 0 EC: 1.1.1.27 |  | |
UniProt | |||||
Find proteins for Q71T02 (Plasmodium falciparum) Explore Q71T02 Go to UniProtKB: Q71T02 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q71T02 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | B [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.167
- R-Value Work: 0.136
- R-Value Observed: 0.137
- Space Group: I 2 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 80.12 | α = 90 |
| b = 85.41 | β = 90 |
| c = 91.7 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2010-03-23 Deposition Author(s): Birkinshaw, R.W., Brady, R.L.
Revision History (Full details and data files)
- Version 1.0: 2010-03-23
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Version format compliance - Version 1.2: 2019-01-30
Changes: Advisory, Data collection, Derived calculations, Experimental preparation, Other - Version 1.3: 2019-02-06
Changes: Data collection, Experimental preparation - Version 1.4: 2023-12-20
Changes: Advisory, Data collection, Database references, Derived calculations, Other, Refinement description
