Download MendeleyCrystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 A resolution
Mishra, P., Prem Kumar, R., Bhakuni, V., Singh, N., Sharma, S., Kaur, P., Perbandt, M., Betzel, C., Singh, T.P.To be published.
2YX2
Crystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 A resolution
- PDB DOI: https://doi.org/10.2210/pdb2YX2/pdb
- Classification: LYASE
- Organism(s): Streptococcus pyogenes
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-04-23 Released: 2007-05-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.224 (Depositor)
- R-Value Work: 0.192 (Depositor)
- R-Value Observed: 0.195 (Depositor)
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hyaluronidase, phage associated | 338 | Streptococcus pyogenes | Mutation(s): 0 Gene Names: HYL P2 EC: 4.2.2.1 |  | |
UniProt | |||||
Find proteins for Q9A0M7 (Streptococcus pyogenes serotype M1) Explore Q9A0M7 Go to UniProtKB: Q9A0M7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9A0M7 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.224 (Depositor)
- R-Value Work: 0.192 (Depositor)
- R-Value Observed: 0.195 (Depositor)
Space Group: H 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 58.77 | α = 90 |
| b = 58.77 | β = 90 |
| c = 586.241 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data collection |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
Entry History
Deposition Data
- Released Date: 2007-05-08 Deposition Author(s): Mishra, P., Prem Kumar, R., Bhakuni, V., Singh, N., Sharma, S., Kaur, P., Perbandt, M., Betzel, C., Singh, T.P.
Revision History (Full details and data files)
- Version 1.0: 2007-05-08
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Refinement description
