Download MendeleyCrystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 A resolution
Mishra, P., Prem Kumar, R., Bhakuni, V., Singh, N., Sharma, S., Kaur, P., Perbandt, M., Betzel, C., Singh, T.P.To be published.
2YX2 | pdb_00002yx2
Crystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 A resolution
- PDB DOI: https://doi.org/10.2210/pdb2YX2/pdb
- Classification: LYASE
- Organism(s): Streptococcus pyogenes
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-04-23 Released: 2007-05-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.224 (Depositor)
- R-Value Work: 0.192 (Depositor)
- R-Value Observed: 0.195 (Depositor)
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hyaluronidase, phage associated | 338 | Streptococcus pyogenes | Mutation(s): 0 Gene Names: HYL P2 EC: 4.2.2.1 |  | |
UniProt | |||||
Find proteins for Q9A0M7 (Streptococcus pyogenes serotype M1) Explore Q9A0M7 Go to UniProtKB: Q9A0M7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9A0M7 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.224 (Depositor)
- R-Value Work: 0.192 (Depositor)
- R-Value Observed: 0.195 (Depositor)
Space Group: H 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 58.77 | α = 90 |
| b = 58.77 | β = 90 |
| c = 586.241 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data collection |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
Entry History
Deposition Data
- Released Date: 2007-05-08 Deposition Author(s): Mishra, P., Prem Kumar, R., Bhakuni, V., Singh, N., Sharma, S., Kaur, P., Perbandt, M., Betzel, C., Singh, T.P.
Revision History (Full details and data files)
- Version 1.0: 2007-05-08
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Refinement description
