Download MendeleyNucleosome Assembly Protein 1 from Plasmodium knowlesi
Merritt, E.A., Arakaki, T., Napuli, A., Mueller, N., Van Voorhis, W.C., Buckner, F.S., Fan, E., Zucker, F., Verlinde, L.M.J., Zhang, L., Hol, W.G.J.To be published.
3HFD | pdb_00003hfd
Nucleosome Assembly Protein 1 from Plasmodium knowlesi
- PDB DOI: https://doi.org/10.2210/pdb3HFD/pdb
- Classification: CHAPERONE, PROTEIN TRANSPORT
- Organism(s): Plasmodium knowlesi strain H
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-05-11 Released: 2009-05-26
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.328 (Depositor), 0.310 (DCC)
- R-Value Work: 0.225 (Depositor), 0.230 (DCC)
- R-Value Observed: 0.230 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Nucleosome assembly protein 1 | 276 | Plasmodium knowlesi strain H | Mutation(s): 0 Gene Names: PKH_130240 |  | |
UniProt | |||||
Find proteins for A0A384KYS3 (Plasmodium knowlesi (strain H)) Explore A0A384KYS3 Go to UniProtKB: A0A384KYS3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A384KYS3 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.328 (Depositor), 0.310 (DCC)
- R-Value Work: 0.225 (Depositor), 0.230 (DCC)
- R-Value Observed: 0.230 (Depositor)
Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 76.895 | α = 90 |
| b = 38.259 | β = 100.41 |
| c = 80.477 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| BALBES | phasing |
Entry History
Deposition Data
- Released Date: 2009-05-26 Deposition Author(s): Arakaki, T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
Revision History (Full details and data files)
- Version 1.0: 2009-05-26
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Version format compliance - Version 1.2: 2017-11-01
Changes: Refinement description - Version 1.3: 2024-02-21
Changes: Data collection, Database references
