Download MendeleyThe Crystal Structure of a GST-like protein from Pseudomonas syringae to 2.4A
Stein, A.J., Chhor, G., Freeman, L., Joachimiak, A.To be published.
3IC8 | pdb_00003ic8
The Crystal Structure of a GST-like protein from Pseudomonas syringae to 2.4A
- PDB DOI: https://doi.org/10.2210/pdb3IC8/pdb
- Classification: structural genomics, unknown function
- Organism(s): Pseudomonas syringae pv. tomato
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2009-07-17 Released: 2009-09-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.246 (Depositor), 0.269 (DCC)
- R-Value Work: 0.192 (Depositor), 0.226 (DCC)
- R-Value Observed: 0.195 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| uncharacterized GST-like proteinprotein | 310 | Pseudomonas syringae pv. tomato | Mutation(s): 0 Gene Names: PSPTO1263 |  | |
UniProt | |||||
Find proteins for Q887M8 (Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)) Explore Q887M8 Go to UniProtKB: Q887M8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q887M8 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.246 (Depositor), 0.269 (DCC)
- R-Value Work: 0.192 (Depositor), 0.226 (DCC)
- R-Value Observed: 0.195 (Depositor)
Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 84.671 | α = 90 |
| b = 102.266 | β = 90 |
| c = 148.336 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SBC-Collect | data collection |
| HKL-3000 | phasing |
| SHELX | phasing |
| MLPHARE | phasing |
| DM | phasing |
| ARP/wARP | model building |
| Coot | model building |
Entry History
Deposition Data
- Released Date: 2009-09-01 Deposition Author(s): Stein, A.J., Chhor, G., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Revision History (Full details and data files)
- Version 1.0: 2009-09-01
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Refinement description, Version format compliance - Version 1.2: 2017-11-01
Changes: Refinement description - Version 1.3: 2024-11-27
Changes: Data collection, Database references, Derived calculations, Structure summary
