Download MendeleyStructural relationship of the tandem PDZ tandem from Grasp55 and its implication in the unconventional secretion pathway
Cartier-Michaud, A., Betzi, S., Shi, X., Shi, N., Morelli, X., Aurrand-Lions, M.To be published.
5GML | pdb_00005gml
Crystal Structure of GRASP Domain of GRASP55 with N terminal extra residues
- PDB DOI: https://doi.org/10.2210/pdb5GML/pdb
- Classification: STRUCTURAL PROTEIN
- Organism(s): Mus musculus
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2016-07-14 Released: 2017-07-19
- Funding Organization(s): National Natural Science Foundation of China, Campus France
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.55 Å
- R-Value Free: 0.311 (Depositor), 0.310 (DCC)
- R-Value Work: 0.261 (Depositor), 0.270 (DCC)
- R-Value Observed: 0.264 (Depositor)
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Golgi reassembly-stacking protein 2 | 235 | Mus musculus | Mutation(s): 0 Gene Names: Gorasp2, GOLPH6 |  | |
UniProt | |||||
Find proteins for Q99JX3 (Mus musculus) Explore Q99JX3 Go to UniProtKB: Q99JX3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q99JX3 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.55 Å
- R-Value Free: 0.311 (Depositor), 0.310 (DCC)
- R-Value Work: 0.261 (Depositor), 0.270 (DCC)
- R-Value Observed: 0.264 (Depositor)
Space Group: I 41 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 132.312 | α = 90 |
| b = 132.312 | β = 90 |
| c = 221.055 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| PHASER | phasing |
| HKL-2000 | data reduction |
| xia2 | data scaling |
Entry History & Funding Information
Deposition Data
- Released Date: 2017-07-19 Deposition Author(s): Shi, N., Shi, X., Morelli, X., Betzi, S., Huang, X.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Natural Science Foundation of China | China | 31370738 |
| Campus France | France | PHC CAI YUANPEI 2013 - Project N26203WD |
Revision History (Full details and data files)
- Version 1.0: 2017-07-19
Type: Initial release - Version 1.1: 2017-10-18
Changes: Author supporting evidence - Version 1.2: 2023-11-08
Changes: Data collection, Database references, Refinement description
