Download MendeleyCrystal structure of Arabidopsis N-amino acetyltransferase 2 bound to HEPES, Acetyl CoA, GABA, and glycerol
Arold, S.T., Hameed, U.F.S.To be published.
8XJF
Crystal structure of Arabidopsis N-amino acetyltransferase 2 bound to HEPES, Acetyl CoA, GABA, and glycerol
- PDB DOI: https://doi.org/10.2210/pdb8XJF/pdb
- Classification: TRANSFERASE
- Organism(s): Arabidopsis thaliana
- Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
- Mutation(s): No
- Deposited: 2023-12-21 Released: 2024-12-25
- Funding Organization(s): Other private
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.233
- R-Value Work: 0.186
- R-Value Observed: 0.190
Starting Model: experimental
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This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| GCN5-related N-acetyltransferase 8 | 212 | Arabidopsis thaliana | Mutation(s): 0 Gene Names: GNAT8 EC: 2.3.1.48 |  | |
UniProt | |||||
Find proteins for Q9ZV06 (Arabidopsis thaliana) Explore Q9ZV06 Go to UniProtKB: Q9ZV06 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9ZV06 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ACO (Subject of Investigation/LOI) Query on ACO | E [auth A] | ACETYL COENZYME *A C23 H38 N7 O17 P3 S ZSLZBFCDCINBPY-ZSJPKINUSA-N |  | ||
| EPE (Subject of Investigation/LOI) Query on EPE | B [auth A] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N |  | ||
| ABU (Subject of Investigation/LOI) Query on ABU | D [auth A] | GAMMA-AMINO-BUTANOIC ACID C4 H9 N O2 BTCSSZJGUNDROE-UHFFFAOYSA-N |  | ||
| GOL (Subject of Investigation/LOI) Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.233
- R-Value Work: 0.186
- R-Value Observed: 0.190
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 60.06 | α = 90 |
| b = 69.74 | β = 90 |
| c = 104.32 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-12-25 Deposition Author(s): Arold, S.T., Hameed, U.F.S.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Other private | Saudi Arabia | King Abdullah University of Science and Technology |
Revision History (Full details and data files)
- Version 1.0: 2024-12-25
Type: Initial release
