Crystal structure of HCoV 229E main protease in complex with Bofutrelvir
Zeng, P., Wang, W.W., Zhang, J., Li, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
3C-like proteinase | 298 | Human coronavirus 229E | Mutation(s): 0  Gene Names: rep, 1a-1b EC: 3.4.22 | ||
UniProt | |||||
Find proteins for P0C6X1 (Human coronavirus 229E) Explore P0C6X1  Go to UniProtKB:  P0C6X1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0C6X1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FHR (Subject of Investigation/LOI) Query on FHR | C [auth A], D [auth B] | ~{N}-[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]-1~{H}-indole-2-carboxamide C25 H32 N4 O4 HPKJGHVHQWJOOT-ZJOUEHCJSA-N |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_002347 (FHR) Query on PRD_002347 | C [auth A], D [auth B] | ~{N}-[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]-1~{H}-indole-2-carboxamide | Peptide-like / Inhibitor |
Length ( Å ) | Angle ( ˚ ) |
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a = 53.631 | α = 90 |
b = 77.028 | β = 91.335 |
c = 77.6 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |