Crystal structure of protein SPO2555 from Silicibacter pomeroyi, Pfam DUF1028
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2imha1 | Alpha and beta proteins (a+b) | Ntn hydrolase-like | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | SPO2555-like | Hypothetical protein SPO2555 | (Ruegeria pomeroyi ) [TaxId: 89184 ], | SCOPe (2.08) |
| A | d2imha3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Ruegeria pomeroyi ) [TaxId: 89184 ], | SCOPe (2.08) |
| A | d2imha2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Ruegeria pomeroyi ) [TaxId: 89184 ], | SCOPe (2.08) |
| B | d2imhb1 | Alpha and beta proteins (a+b) | Ntn hydrolase-like | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | SPO2555-like | Hypothetical protein SPO2555 | (Ruegeria pomeroyi ) [TaxId: 89184 ], | SCOPe (2.08) |
| B | d2imhb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Ruegeria pomeroyi ) [TaxId: 89184 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | SPO2555-like | 8022164 | 4002530 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Class II glutamine amidotransferases | 8034544 | 3000131 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Class II glutamine amidotransferases | 8034544 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.60.20.10 | Alpha Beta | 4-Layer Sandwich | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | Aminohydrolase, N-terminal nucleophile (Ntn) domain | CATH (4.3.0) |
| B | 3.60.20.10 | Alpha Beta | 4-Layer Sandwich | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | Aminohydrolase, N-terminal nucleophile (Ntn) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF06267 | Family of unknown function (DUF1028) (DUF1028) | Family of unknown function (DUF1028) | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029055 | Nucleophile aminohydrolases, N-terminal | Homologous Superfamily | |
| IPR010430 | Protein of unknown function DUF1028 | Family |
