1U0Q | pdb_00001u0q

Structure of a Llama VHH domain raised against a carbazole molecule

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 
    0.250 (Depositor) 
  • R-Value Work: 
    0.221 (Depositor), 0.218 (DCC) 
  • R-Value Observed: 
    0.221 (Depositor) 

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This is version 2.1 of the entry. See complete history. 


Literature

Crystal Structure of a Llama VHH Domain Raised Against a Carbazole Hapten

Cambillau, C., Spinelli, S., Desmyter, A., Verrips, T.

To be published.

Macromolecules
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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
immunoglobulin heavy chain variable domain
A, B
125Lama glamaMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
PCA
Query on PCA
A, B
L-PEPTIDE LINKINGC5 H7 N O3GLN
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free:  0.250 (Depositor) 
  • R-Value Work:  0.221 (Depositor), 0.218 (DCC) 
  • R-Value Observed: 0.221 (Depositor) 
Space Group: P 32 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 48.235α = 90
b = 48.235β = 90
c = 163.983γ = 120
Software Package:
Software NamePurpose
DENZOdata reduction
SCALAdata scaling
AMoREphasing
CNSrefinement
CCP4data scaling

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2005-06-28
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 2.0: 2019-12-25
    Changes: Advisory, Derived calculations, Polymer sequence
  • Version 2.1: 2024-11-06
    Changes: Advisory, Data collection, Database references, Structure summary